[Chimera-users] saving a rotated map

[William Rice]

Hi Filip,

Another way to do it, if you are somewhat comfortable with python, is to 
use sparx, as described on this page:
http://sparx-em.org/sparxwiki/align_chimera

This will give you the Euler angles which describe the rotations, and 
can be converted to most of the common angle conventions (spider, EMAN, 
imagic, ...).

Bill
Filip Van Petegem wrote:
> Dear chimera users,
>
> I have a problem with saving a cryoEM map after rotating/translating
> it. I've used the 'fit in map' option to superpose 2 maps (in ccp4
> format)  This seems to work fine, but when I save the reoriented map
> (in any of the available formats), and try to open it, it is back to
> the original position.
>
> Is there any way to save the reoriented map file?
>
> Best regards,
>
> Filip Van Petegem
>
>
>   


-- 
William J. Rice, Ph.D.
Senior Scientist
New York Structural Biology Center
89 Convent Avenue, NY, NY 10027