[Chimera-users] Regarding Metal Fixing in Protein

Amit Jaiswal amitjai20 at gmail.com
Wed Oct 24 05:41:41 PDT 2012


Dear Eric,
              Many thanks for your mail. Elaine gave me some tips regarding
metal fixing and thus I am trying it out. I will be taking some more of
your time if the problem is not solved. Thank you for your time.

With kind regards,
Amit Jaiswal,
Pondicherry University,
Pondicherry,
India.

On Tue, Oct 23, 2012 at 11:52 PM, Eric Pettersen <pett at cgl.ucsf.edu> wrote:

> Also, if you use the current daily build you can start the atom at a
> particular xyz position.
>
> --Eric
>
>                         Eric Pettersen
>                         UCSF Computer Graphics Lab
>                         http://www.cgl.ucsf.edu
>
> On Oct 23, 2012, at 11:16 AM, Elaine Meng wrote:
>
> Dear Amit,
> You could select the metal ion (Ctrl-click on it) and then use Movement
> Mouse Mode (in menu under Tools... Movement).  In that tool, you would
> change mode to "Move selection" if you want to use the mouse to move the
> metal only.  To go back to moving the whole structure, change back to
> "Normal."
>
> This will not necessarily make a reasonable structure... it will just
> leave the metal wherever you put it.
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> On Oct 23, 2012, at 1:26 AM, Amit Jaiswal wrote:
>
> Dear Sir /Mam,
>
>                     I am new to Chimera and thus facing problems in
> inserting Metal in my protein. I am using the Build structure command in
> Chimera but I am unable to move the metal from one place to the other.
> Please guide me out in fixing the metal.
>
>
>
>
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> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users
>
>
>
>
>
>


-- 

Yours Sincerely,

~~~~~~~~~~~~~~~~~~~~~~~~
Amit Jaiswal,
Department of Bioinformatics,
School of Life Sciences,
Pondicherry Central University,
Kalapet, Pondicherry,
Puducherry - 605 014.
Phone No.: +91 8124954834.

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