[Chimera-users] Match structures and density maps

Tom Goddard goddard at sonic.net
Thu Mar 15 17:05:10 PDT 2012

Hi Sam,

   I take it that your PDB models are already aligned with the maps.  
Then it is easy.  Just align the PDB models #0 and #1 and then realign 
the corresponding maps #2 and #3 using

     matrixcopy #0 #2
     matrixcopy #1 #3




> Good morning,
> I have two density maps, which I want to align for comparison. They 
> are associated to 2 different PDB structures that I can use as 
> references.
> I want to match the two PDB structures, and use the 
> rotation/translation matrix of this alignment to move the density map 
> as well.
> Is that possible ?
> Thanks
> Sam Meyer
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