[Chimera-users] resolution for volume fitting

Elaine Meng meng at cgl.ucsf.edu
Wed Mar 7 15:33:29 PST 2012


Hi Bala,
Unfortunately, I can't answer that one with any confidence -- I'm hoping that somebody who actually does fitting in the course of their research will respond.
Best,
Elaine

On Mar 7, 2012, at 1:51 PM, Bala subramanian wrote:

> Hi Elaine,
> Thank you. 
> I wanted to ask about choosing an optimal threshold level of the volume data (the experimental map) instead of which i wrote as resolution of the volume data. I admit that i have not mentioned it clearly in the previous mail. 
> 
> I tried to fit a structure on to a map and i found that the correlation value, Avg and Inside in the fit-list changes depending up on the threshold level of the volume data i chose. So i am not getting how to choose a correct threshold value of the volume data. 
> Cheers,
> Bala
> 





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