[Chimera-users] help with how to save a volumes
meng at cgl.ucsf.edu
Mon Jun 18 09:22:34 PDT 2012
The map formats don't include rotation information, so you would need to resample the rotated map on the grid of the other map. This interpolates and makes a new map model.
Please see here for details on how to save a map after fitting:
However, Chimera does not write the spider format. You would need to save in MRC, NetCDF, Chimera map, or BRIX format.
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco
On Jun 15, 2012, at 7:16 AM, Sara Sandin wrote:
> Thank you for a great software :)
> I have one problem. I have two em density maps in spider format.
> After I have used the fit in map option and one density has been rotated
> and shifted,
> how do I save a new spider file with the applied rotation and translation?
> Thank you, Sara
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