[Chimera-users] minimization with nonstandard atoms

Eric Pettersen pett at cgl.ucsf.edu
Tue Feb 7 11:18:09 PST 2012

On Feb 7, 2012, at 11:13 AM, Elaine Meng wrote:

> This approach requires using the minimize command and its "fragment"  
> option, only available in the command (not GUI), and in fairly  
> recent builds of Chimera 1.6.

In fact there is a bug in AddCharge in the most recent build that will  
trip you up with the 1a6m structure.  The bug is fixed now and will be  
in the next successful build.


                         Eric Pettersen
                         UCSF Computer Graphics Lab

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