[Chimera-users] Rapid Access - a different question/request
Eric Pettersen
pett at cgl.ucsf.edu
Wed Aug 8 14:21:59 PDT 2012
Looks like I should implement a scroll bar. I'll try to get to it soon. In the interim, if you resize the window longer, it will show more items if that helps any.
--Eric
On Aug 8, 2012, at 2:14 PM, Boaz Shaanan wrote:
> Hi Eric,
>
> I actually find the Rapid Access very convenient, however I wonder: is the list limited to the n most recent sessions/pdb ? I actually am missing the option of paging further down the list to jobs that are not in the list but which are quite recent. Is there already an option to do this? The browse button does other things (at list in my hands).
>
> Cheers,
>
> Boaz
>
>
> Boaz Shaanan, Ph.D.
> Dept. of Life Sciences
> Ben-Gurion University of the Negev
> Beer-Sheva 84105
> Israel
>
> E-mail: bshaanan at bgu.ac.il
> Phone: 972-8-647-2220 Skype: boaz.shaanan
> Fax: 972-8-647-2992 or 972-8-646-1710
>
>
>
>
>
> ________________________________________
> From: chimera-users-bounces at cgl.ucsf.edu [chimera-users-bounces at cgl.ucsf.edu] on behalf of chimera-users-request at cgl.ucsf.edu [chimera-users-request at cgl.ucsf.edu]
> Sent: Monday, August 06, 2012 10:00 PM
> To: chimera-users at cgl.ucsf.edu
> Subject: Chimera-users Digest, Vol 112, Issue 6
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> Today's Topics:
>
> 1. Modelling of missing regions ussing Chimera (Gleb Novicov)
> 2. (no subject) (Merced Malabanan)
> 3. Re: Rapid Access file list (Eric Pettersen)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Sat, 4 Aug 2012 15:44:12 +0400
> From: Gleb Novicov <gnovikov87 at gmail.com>
> To: chimera-users at cgl.ucsf.edu
> Subject: [Chimera-users] Modelling of missing regions ussing Chimera
> Message-ID:
> <CAN=J6WkT9_GH8YYT8U=Nbt-3hhor_YvNHrndwXK6L4ix75uHvA at mail.gmail.com>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Dear Chimera's users!
>
>
> I need to model some missing segments ( In particular case I need to build
> missing N and C termi ) of my protein ussing Modeller's options. Could you
> tell me about possible solution of that issue ?
>
>
> On my win7 I have installed Chimera as well as Modeller v 9.10 suite.
>
> I've defined Modeller pathways in the Chimera's Model pool options but when
> I've selected option Prune seection to define region of interest I didnt
> obtain anythinf from both of Chimera or Modeller. On other hand the option
> Structure -> Modeller tools also not available for me. Does it means that
> I've installed modeller incorrectly ?
>
> Also I've used runmod.dat script with defined variables from which I
> obtained the below
>
> C:\Users\own\Desktop\worktemp>runmod.bat
> usage: mod9.10 script [...]
>
> Doest this means that all work fine ?
>
> By the way after executing of that script I could not launch modeller by
> means of mod9.10.exe from modeller folder. The error from modeller was
>
> C:\Program Files\Modeller\bin>mod9.10.exe
> FATAL ERROR: MODINSTALL9v10 environment variable not set: incomplete
> MODELLER in
> stallation
>
>
> Could you explain me whats I've done wrong and how I could fix this problem?
>
> Thanks for help
>
> Gleb
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> Message: 2
> Date: Sun, 5 Aug 2012 22:57:31 -0400
> From: Merced Malabanan <mmu4 at buffalo.edu>
> To: chimera-users at cgl.ucsf.edu
> Subject: [Chimera-users] (no subject)
> Message-ID:
> <CACZ6DD870yvJvwBw7ohxhsusQ66S4SwP-QKqqGuOjA5rKNtobw at mail.gmail.com>
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>
> Hi,
>
> I'm trying to get used to the new Rapid Access interface of chimera. But
> how do you remove the list (or items on the list) on the right side of the
> interface?
>
> Thanks.
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> ------------------------------
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> Message: 3
> Date: Mon, 6 Aug 2012 11:11:16 -0700
> From: Eric Pettersen <pett at cgl.ucsf.edu>
> To: Merced Malabanan <mmu4 at buffalo.edu>
> Cc: chimera-users at cgl.ucsf.edu
> Subject: Re: [Chimera-users] Rapid Access file list
> Message-ID: <DA3D7EC8-5E7D-4C69-AAE3-BE7AFD0761C5 at cgl.ucsf.edu>
> Content-Type: text/plain; charset="us-ascii"
>
> On Aug 5, 2012, at 7:57 PM, Merced Malabanan wrote:
>
>> Hi,
>>
>> I'm trying to get used to the new Rapid Access interface of chimera. But how do you remove the list (or items on the list) on the right side of the interface?
>
> Since the file list is typically the most useful thing in the interface, I guess I'm mystified as to why you would want to remove it. Could you describe your motivation for wanting to get rid of the list/items a little more?
>
> --Eric
>
> Eric Pettersen
> UCSF Computer Graphics Lab
> http://www.cgl.ucsf.edu
>
>
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