[Chimera-users] loading trajectories with no box line

Michael F. Bruist m.bruist at usciences.edu
Tue Apr 24 13:40:40 PDT 2012

Is there a way to load trajectories that do not have box lines?  I have trajectories from which most solvent and ions have been stripped.  They were written with ptraj as amber coordinate files with the "nobox" option.  I cannot get these to stay in register for MD movie.  I do not have this problem for trajectories for which the box line has not been removed.

Mike Bruist

Dr. Michael F. Bruist
Associate Professor of Biochemistry
Department of Chemistry & Biochemistry
Griffith Hall 147
University of the Sciences in Philadelphia
Philadelphia, PA 19104-4495

Phone (Office & Voice Mail):     (215) 596-8530
Department Phone:                        -8839
Department Fax:                        -8543
E-mail:                  m.bruist @usp.edu
web page:            http://tonga.usp.edu/bruist

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