[Chimera-users] CASTp unable to recognise pdb format

George Tzotzos gtzotzos at me.com
Sat Dec 3 10:00:47 PST 2011


Thank you Elaine. I shall do.

Best regards

George

On Dec 3, 2011, at 6:46 PM, Elaine Meng wrote:

> Hi George,
> While it is true that the CASTp server
> 
> <http://sts.bioengr.uic.edu/castp/calculation.php>
> 
> complains about your PDB file written from Chimera, it gives the same error message for a couple of PDB files that I got directly from the RCSB PDB.
> 
> ... so, I'm thinking there is some problem with the server.  You may want to contact its authors.
> Best,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> 
> 
> On Dec 3, 2011, at 9:31 AM, George Tzotzos wrote:
> 
>> Hi everybody,
>> 
>> I used Modeller to generate a structure which I then saved using Chimera. The CASTp server complains that the structure is not in pdb format.
>> 
>> I'm attaching the pdb file to help with the diagnostics.
>> 
>> Good weekend to all
>> 
>> George
>> 
>> <modeller.pdb>_______________________________________________
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>> Chimera-users at cgl.ucsf.edu
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> 




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