[Chimera-users] To retrieve intermediate results while using Minimize Structure

[Elaine Meng]

Hi Saumya,
If you already did the minimization, there is no way.  You just have to specify a certain number of minimization steps, then save, then run again with a certain number of steps, etc.
Elaine
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Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Nov 1, 2010, at 9:09 AM, saumyak at ebi.ac.uk wrote:

> Hello,
> I am using Chimera's Minimize structure for protein minimization. I was
> hoping if you could suggest me a way to retrieve intermediate PDB files
> that are generated during the minimization procedure.
> Many thanks,
> Saumya