[Chimera-users] attributes

Elaine Meng meng at cgl.ucsf.edu
Fri May 28 13:52:35 PDT 2010

Hi Marco,
There is a problem with the residue specifications in the first column  
of your file.  Here are the first few lines of your file:

attribute: deltashift
recipient: residues
         :4      0.29343
         :5.0000 0.029195
         :6.0000 0.14888
         :7.0000 0.087586
         :8.0000 0.058391
         :9.0000 0.30934
         :10.000 0.0000

Only residue 4 is assigned the deltashift attribute (value 0.29343).   
None of the other assignment lines do anything because :5.0000 (etc.)  
does not specify a residue.  If you modify the assignment file to  
contain :5 :6 etc. instead, I think everything will work as expected!   
Location of the file does not matter.

I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On May 28, 2010, at 1:19 PM, sette at uniroma2.it wrote:
> Hi,
> I created my attribute file (attached) and defined by I cannot see  
> it in the Render (by residues) attributes.
> I missed something? Since it was defined I don't think it has to be  
> put in some particolar directory, or not?
> Thanks,
> Marco

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