[Chimera-users] NAMD trajectory and AMBER topology

Francesco Musiani francesco.musiani at unibo.it
Tue Mar 2 03:43:44 PST 2010

Hi all,
I would like to visualize in Chimera a trajectory obtained with the 
program NAMD,
but I have a .prmtop topology file generated using AMBER instead of a 
.psf topology file.

I have these files beacuse in NAMD is possible to use AMBER format topology.

Is it possible to implement an additional feature in Chimera which 
allows to visualize
NAMD trajectory using AMBER topology?

Thanks in advance,


Francesco Musiani
Laboratory of Bioinorganic Chemistry
Department of Agro-Environmental Science and Technology
University of Bologna
Viale Giuseppe Fanin 40, I-40127 Bologna, Italy
Phone: +39-051-2096236 - Fax: +39-051-2096203
E-mail: francesco.musiani at unibo.it
Web: http://bioinorg.agrsci.unibo.it

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