[Chimera-users] Hydrophobicity surface

Beale, John John.Beale at stlcop.edu
Thu Jun 10 05:41:46 PDT 2010

I am creating a hydrophobicity surface for a protein using the "Presets
-> Hydrophobicity surface"  commands. I would like to know what the
colors on the surface are telling me. I see a couple of shades of blue,
white, and pink to orange. What do these colors mean?




John M. Beale, Jr., Ph,D.

Professor of Medicinal Chemistry and Pharmacognosy

St. Louis College of Pharmacy

4588 Parkview Place 

St. Louis, Missouri  63110


Cell: (314)-315-0409

FAX (314) 446-8460

jbeale at stlcop.edu






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