[Chimera-users] Measuring dimer rotation

Elaine Meng meng at cgl.ucsf.edu
Wed Jun 2 11:51:49 PDT 2010

Hi Bobby,
You can also do it now with the MatchMaker graphical interface (under Tools... Structure Comparison), using the chain pairing option "Specific chain(s) in reference structure with specific chain(s) in match structure".  Choose a chain in the reference on the left side of the dialog, then choose the corresponding chain in the other structure on the right side of the dialog, choose another chain in the reference, etc.

I just verified that it works.
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Jun 2, 2010, at 11:40 AM, Tom Goddard wrote:

> The bug where mmaker did not match chains C with C and D with D has been fixed today and the order specified in the command should be respected in tomorrow's daily builds.
>     Tom

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