[Chimera-users] hide dust

[Giovanni Cardone]

I think that the option 'fullmap True', when appended to the command  
mask, should solve your problem about different map size and origin.
About the smoothness of the iso-surface from the mask, I can just  
agree that it is different.

Giovanni



On Apr 20, 2010, at 12:06 PM, weimin wu wrote:

> Sometimes after we remove the dust using the tool of hiding dust, we
> want to save the map directly instead of using command "mask #0 #0" to
> generate a maskfile. The reason is that the masked map has minimized
> map size and different with original one. Even after we recover the
> map size and origin, it always has half pixel issue, and if we apply
> this mask to original map, the output will have some masking artifact.
> The iso-surface of the output will not be as smooth as original map or
> the map after hiding dust.
>
> weimin
> _______________________________________________
> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users