[Chimera-users] hide dust

Giovanni Cardone cardoneg at mail.nih.gov
Tue Apr 20 10:17:05 PDT 2010

I think that the option 'fullmap True', when appended to the command  
mask, should solve your problem about different map size and origin.
About the smoothness of the iso-surface from the mask, I can just  
agree that it is different.


On Apr 20, 2010, at 12:06 PM, weimin wu wrote:

> Sometimes after we remove the dust using the tool of hiding dust, we
> want to save the map directly instead of using command "mask #0 #0" to
> generate a maskfile. The reason is that the masked map has minimized
> map size and different with original one. Even after we recover the
> map size and origin, it always has half pixel issue, and if we apply
> this mask to original map, the output will have some masking artifact.
> The iso-surface of the output will not be as smooth as original map or
> the map after hiding dust.
> weimin
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