[Chimera-users] Transparent Spheres

Waight, Andrew Andrew.Waight at med.nyu.edu
Wed Sep 30 08:33:29 PDT 2009

Hello everyone again. 

                     I apologize for a potentially embarassing question but is it possible to display sidechains as transparent spheres with solid stick representation inside. Seeing as I also can't find an image in the Chimera gallery where it is represented as such, I am wondering if it is possible to individually color (and set opacity) on spheres. I am also aware that vdw will create dots of varying density, but is it alternatively possible to display vdw as solid surface with opacity. Thanks to all for your patience.


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