[Chimera-users] Write out phi/psi angles

Eric Pettersen pett at cgl.ucsf.edu
Mon Sep 21 16:16:55 PDT 2009

On Sep 21, 2009, at 4:07 PM, David Belnap wrote:

> I've read on the archived lists that Chimera does not have a
> Ramachandran plot viewer.  I found phi/psi angles by selecting
> "Actions", "Inspect", then inspecting "Residue".  Can I output the  
> phi/
> psi angles to a text file?  If so, how do I write out that  
> information?

Hi David,
	Using the Render By Attribute tool, you can write out any attribute  
value (in Chimera phi/psi angles are treated as attributes of  
residues) using that tool's File->Save Attributes menu entry.  You  
need to select the attribute in the tool first.  The save dialog will  
allow you to restrict the save to the current selection if you like.


                         Eric Pettersen
                         UCSF Computer Graphics Lab

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