[Chimera-users] missing ribbon loop

Elaine Meng meng at cgl.ucsf.edu
Mon Nov 30 14:16:58 PST 2009

My guess is there is something strange about the structure or the  
format of the input file -- for example, maybe the residues don't all  
have the same chain ID, or the backbone atoms do not have the expected  
names (N,CA,C,O).  If Chimera does not show a ribbon at that position  
even though you told it to show ribbons for everything, it is probably  
necessary to edit the input file to fix the problem.  I couldn't be  
more specific without seeing the file.
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Nov 27, 2009, at 2:16 AM, klumpler at sci.muni.cz wrote:

> Hallo,
> please, can you tell me how to create missing part of ribbon
> representation of loop?
> Using "ball and stick" representation is peptide chain complete  
> without
> gap, but in "ribbon" representation is one residue missing and forms  
> the
> gap.
> Thank you very much

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