[Chimera-users] saving a rotated map

[Elaine Meng]

Hi all,
The model number of the volume needs to go before the operation:

vop #1 resample onGrid #0

Be aware that there is some data loss associated with interpolating  
the values of the original map to get the values at the new grid  
positions.

To save the resampling result to a file, you could use "File... Save  
Map as" in the Volume Viewer dialog or the command "volume" with its  
"save" option.
Elaine

On Mar 6, 2009, at 10:25 AM, Tom Goddard wrote:

> Gabe has it right except the command has to start with "vop":
>
>     vop resample #1 onGrid #0
>
> Here's the documentation for the volume operation (vop) command:
>
>     http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/vop.html
>
>   Tom
>
>
>
> Gabriel Lander wrote:
>> Hi Scott,
>> This question has been coming up an awful lot in lab lately, Tom
>> showed me how to do this a while back -
>> Say you open 2 maps - #0 and #1
>> you fit map #1 into map #0, and then in the command line type:
>> "resample #1 onGrid #0"
>> it will save the density #1 onto the same grid space as #0.
>> -gabe
>>
>>
>> On Mar 5, 2009, at 7:34 PM, Scott Stagg wrote:
>>
>>
>>> Hello all,
>>>    I would like to save a rotated density map after using the fit
>>> map in map feature, but I can't figure out how to save the
>>> transformed map. Does anyone have any suggestions?
>>>
>>> Thanks,
>>> Scott
>>>
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