[Chimera-users] thermal ellipsoids

Eric Pettersen pett at cgl.ucsf.edu
Wed Jul 8 09:56:39 PDT 2009


Hi David,
	I guess my question is how important is fancy5 and fancy6?  Those  
will be the hard ones for me to do.  Keep in mind that "display of ...  
major ellipses" will look like fancy3 except that you will be able to  
see the arcs of the major ellipses without using a transparent  
ellipsoid.  The other "fancy modes" are not difficult to do.

--Eric
                         Eric Pettersen
                         UCSF Computer Graphics Lab
                         http://www.cgl.ucsf.edu


On Jul 8, 2009, at 8:29 AM, David Chenoweth wrote:

> Eric and Elaine,
>
> The display of axes and major ellipses as well as a probability- 
> level-to-scaling-factor calculator will be a great addition to  
> Chimera and I think more small molecule people and Organic chemists  
> will start to use the program. I'm really excited about this feature  
> being added to Chimera and I wanted to pass along some ideas for  
> displaying the axes as well as octants. The program RASTEP (Raster3D  
> Thermal Ellipsoid Program) has some very nice rendering features  
> that would be great options to have in chimera. I attached an  
> example below.
>
> Thanks to the Chimera team for working on this feature,
> Dave Chenoweth

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