[Chimera-users] Display Molecule Name

christopher lau cdlau at ucsd.edu
Sun Jul 5 18:29:42 PDT 2009


Hi everyone,
Thanks for your help, using

open 1g1p
rainbow models
[ then I used the "Tile Structures" tool to spread the structures out ]
labelopt info molecule
la @/serialNumber=1

Worked perfectly!

Is there a way to change the font of the model number, it displays the
molecule as #0.1, etc but the font is incredibly small

Thanks,

Chris

On Sat, Jul 4, 2009 at 10:00 AM, Eric Pettersen <pett at cgl.ucsf.edu> wrote:

> Hi Chris, Yet *another* way to do this, assuming you know the approximate
> x,y positions of your molecules on the screen would be to title them with
> the 2dlabels command (
> http://www.cgl.ucsf.edu/chimera/current/docs/UsersGuide/midas/2dlabels.html).
>  Assuming that your Molecule variable is 'm' then m.name is the molecule
> name (as shown in the Model Panel) and str(m) gives the same text as the
> help balloon would if the mouse were hovered over the Molecule.
>
> --Eric
>
> On Jul 2, 2009, at 11:02 PM, cdlau at ucsd.edu wrote:
>
> Hi,
>
> Thanks for the response.  This would not work for my case because I am
> writing a plugin for ViewDock for use with a Tiled Wall Display.  I was
> hoping there was a setting that was available to show the molecule name
> (if a setting does exist I can initiate it with runCommand).  Does anyone
> know if this is possible?
>
> Thanks,
>
> Chris
>
> On Thu, 2 Jul 2009, cdlau at ucsd.edu wrote:
>
> Hi,
>
> I was wondering if there was a way to display the molecule name that is
> being shown in chimera.  A simple display such as "molecule #0.10" below
> the rendered molecule would be great.
>
> Thanks for your help,
>
> Chris
>
> Just place the mouse over the item you want to know more about and a popup
> balloon will tell you about it.  The text starts with the model number,
> e.g., #0.10, and may or may not have additional information, i.e., for an
> atom it includes the residue name and sequence number and the atom name.
>
>       - Greg
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>
>
>
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