[Chimera-users] Surfnet command line

Eric Pettersen pett at cgl.ucsf.edu
Tue Dec 15 11:48:58 PST 2009

Hi JD,
	If you resort to Python, the following script should do it:

from SurfNet import atoms_surfnet
atoms_surfnet("your atom spec here")

There are other arguments you could provide to atoms_surfnet() if you  
wanted non-default behavior.  Have a look in SurfNet/base.py to see  
what they are.


On Dec 15, 2009, at 8:10 AM, Elaine Meng wrote:

> Hi JD,
> Sorry, there is no surfnet command.  Perhaps it can be done with  
> python, but one of the other developers would have to reply about  
> that.
> Best,
> Elaine
> On Dec 15, 2009, at 12:26 AM, Jean Didier Pie Marechal wrote:
>> Dear All,
>> is there a command line equivalent for surfnet applied to atom  
>> selection (not interfase)?
>> Best,
>> JD
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