[Chimera-users] rmsd in nogui mode

Eric Pettersen pett at cgl.ucsf.edu
Wed Sep 10 15:06:19 PDT 2008

Hi Ryan,
	The RMSD info is printed on standard output.  If you are using any  
Unix-like shell, you can redirect standard output into a file with the  
'>' operator, something like:

	chimera --nogui script.cmd > chimera.out

If you aren't using a Unix-like shell, perhaps you could describe how  
you are executing Chimera in nogui mode and we can go from there.


                         Eric Pettersen
                         UCSF Computer Graphics Lab

On Sep 10, 2008, at 2:00 PM, Ryan wrote:

> Hi again,
> I'd like to save the rmsd values calculated by chimera's 'rmsd'  
> command when running in 'nogui' mode.  What's the best way to go  
> about this?  Thanks!
> -ryan _______________________________________________
> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users

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