[Chimera-users] How to add change to multiple molecules

CHIU,YEUNG adolphsdchiu at ufl.edu
Mon Nov 3 03:51:55 PST 2008

Hi Yang

You mean adding "charge"? I think you can add charge to all of the 
models as long as you check the box referred to them at the 
bottom. If you want to add charge to some models only, you can 
~disp all, then display one by one and add charge to them. I hope 
this would help. Good luck!

On Sun Nov 02 20:32:46 EST 2008, zhouyang 
<zhouyang at mail.shcnc.ac.cn> wrote:

> Hi
> Recently I wanna add change to a series of molecules for DOCK6 
> which are stored in a single .mol2 file. It seems that the 
> Chimera GUI can just add change for one molecules at one 
> operation. I wonder how to add change to all of them?
> Alternatively I just suppose to use 'split' shell command to 
> seperate these molecules to single files and then add change to 
> them. Then the key point is whether Chimera can run in 
> command-line mode so that I can achieve by writing a shell 
> script?
> Thanks in advance
> Yang
> zhouyang at mail.shcnc.ac.cn
> 2008-11-03 ?????? ZHOU Yang
> Master Candidate
> Drug Discovery and Design Center
> Shanghai Institute of Meteria Medica
> China Academy of Sciences
> 555 Zu Chong Zhi Road , Zhang Jiang Hi-Tech Park, Shanghai, China 
> (Postcode: 201203)
> Mobile: 86-137-6430-7897
> MSN: zhouyang_pku at hotmail.com
>   _______________________________________________
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> Chimera-users at cgl.ucsf.edu
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Sincerely yours

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