[Chimera-users] trajectory analysis

Eric Pettersen pett at cgl.ucsf.edu
Mon Mar 31 12:01:42 PDT 2008

Hi Bala,
	Chimera doesn't write any trajectory formats, so the answer is  
clearly no.  VMD might be able to do this, though I'm guessing it  
doesn't write the GROMACS .trj file format.  There does seem to be a  
standalone script that does exactly what you want though.  It's here:



On Mar 31, 2008, at 2:42 AM, bala wrote:

> Dear Chimerians,
> I have an amber trajectory. I want to use gromacs to do some  
> analysis. Is it possible in chimera to
> i) convert amber traj to gromacs traj format
> ii) convert amber topo file to gromacs topo format
> Thanks,
> Bala
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> Chimera-users at cgl.ucsf.edu
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