[Chimera-users] regd. DMS

Vinay Kumar ksvinaykumar at gmail.com
Fri Feb 8 02:56:57 PST 2008


Hello all,
I had installed DMS previously. And recently upgraded my OS to fedora
8. When i try to recompile dms this is the following error i get. I
did not face this the previous time!! could anyone guide me??

Regards
Vinay

Following is the error -----

[hpws at localhost dms]$ make
cd libpdb ; make OPT="-O"
make[1]: Entering directory `/home/hpws/dms/libpdb'
cc -O    -c -o pdb_read.o pdb_read.c
pdb_read.c:25:20: error: stdio.h: No such file or directory
pdb_read.c:26:20: error: ctype.h: No such file or directory
pdb_read.c:27:21: error: string.h: No such file or directory
In file included from pdb_int.h:20,
                 from pdb_read.c:28:
pdb.h:516: error: expected ')' before '*' token
pdb.h:518: error: expected ')' before '*' token
In file included from pdb_read.c:37:
read_format.i:19: error: 'NULL' undeclared here (not in a function)
In file included from pdb_read.c:45:
pdbrun6_read.i:45: error: initializer element is not constant
pdbrun6_read.i:45: error: (near initialization for 'pdbrun6[26]')
pdbrun6_read.i:46: error: initializer element is not constant
pdbrun6_read.i:46: error: (near initialization for 'pdbrun6[27]')
pdbrun6_read.i:47: error: initializer element is not constant
pdbrun6_read.i:47: error: (near initialization for 'pdbrun6[28]')
pdbrun6_read.i:48: error: initializer element is not constant
pdbrun6_read.i:48: error: (near initialization for 'pdbrun6[29]')
pdb_read.c:59: error: expected ')' before '*' token
pdb_read.c: In function 'pdb_read_string':
pdb_read.c:304: warning: incompatible implicit declaration of built-in
function 'memset'
pdb_read.c:556: warning: incompatible implicit declaration of built-in
function 'strncpy'
pdb_read.c:913: warning: incompatible implicit declaration of built-in
function 'sscanf'
pdb_read.c:978: warning: incompatible implicit declaration of built-in
function 'sscanf'
pdb_read.c:992: warning: incompatible implicit declaration of built-in
function 'sscanf'
pdb_read.c:1027: warning: incompatible implicit declaration of
built-in function 'sscanf'
pdb_read.c:1047: warning: incompatible implicit declaration of
built-in function 'sscanf'
pdb_read.c:1076: warning: incompatible implicit declaration of
built-in function 'sscanf'
pdb_read.c:1094: warning: incompatible implicit declaration of
built-in function 'sscanf'
make[1]: *** [pdb_read.o] Error 1
make[1]: Leaving directory `/home/hpws/dms/libpdb'
make: *** [pdb] Error 2



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