[Chimera-users] automating/scripting bond rotation

E. Merkley edm4 at u.washington.edu
Thu Aug 28 15:33:42 PDT 2008

Hello chimera team,

I am trying to evaluate which regions of (chi1,chi2) space for a 
particular tryptophan residue create steric clashes with a bound ligand. 
I see from the archives that findclash can be called from the command 
line, but I have been unable to find a way to use the "adjust torsions" 
feature from the command line.  Is this possible?  If not, any other 

Thanks in advance,
Eric Merkley

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