[Chimera-users] Chimera doesn't display AMBER molecular dynamics trajectories with periodic boundary condition.

juyong Lee drfaust23 at gmail.com
Thu Jan 11 00:26:44 PST 2007

Hi, I'm using chimera 1.2309 version.

And I found out that MD movie module in chimera doesn't display AMBER
trajectory file with periodic condition correctly.

I works well only with non-periodic condition trajectory file.

Another visualization program, VMD, has two seperated options for AMBER
trajectory file: with periodic condition and not.

I prefer display style of chimera. So, I really hope to see my AMBER
trajectory with Chimera.

Do you have any tips for this problem? or have plan to add the format, with
periodic boundary condition. :-)

Thanks again for your great program and have a nice day!

Lee, juyong
Ph.D student, Department of chemistry, Seoul National University, Korea.
drfaust23 at gmail.com
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