[Chimera-users] Making a new covalent bond

Goel, Manisha MAG at stowers-institute.org
Mon Feb 27 15:37:50 PST 2006


I have often come across detailed answers from chimera group for a
variety of modelling problems on pdb-l or bioinformatics mailing lists.
My problem should relatively easy to solve except that I havn't been
able to figure it out myslef on chimera.

I just need to make a covalent bond between a sugar molecule and an
aminoacid (aa-COOH + sugar-OH --> H2O + aa-sugar).
Is there an easy way of doing this manipulation in Chimera ?
Please advice ?

Thanks a lot for your time and effort.

-Manisha Goel

Post-doc associate
Bioinformatics Lab
Stowers Institute for Medical Research
Kansas city-66210

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