[Chimera-users] chimera and hydrophobic potentials

Thomas Goddard goddard at cgl.ucsf.edu
Thu Apr 8 11:45:56 PDT 2004

Hi Miguel,

  Send me some example k2a output and I'll send you a little Python program
that will convert it into a Delphi file readable by Chimera DelphiViewer.


> Date: Thu, 8 Apr 2004 19:33:31 +0100
> From: Miguel Ortiz =?iso-8859-15?Q?Lombard=EDa?= <mol at ysbl.york.ac.uk>
> Subject: Re: [Chimera-users] chimera and hydrophobic potentials
> Hi Tom,
> Thank you very much for your comments.
> Part of the problem is that I don't trust the "delphi" maps that
> GRID produces. Actually, I've been able to open some of them with 
> chimera. Other programs ablo to open such maps (like vmd) can't
> open any of them.
> Yes, I've used k2a, and it works: it produces an ascii map that
> looks sensible. My problem here is that my programming skills are 
> very reduced! I could work it out on a "model" program, but not 
> from scratch. Have you something like that?
> Thank you again, your answer has been very useful.
> Best regards,
> Miguel
> -- 
> Miguel Ortiz Lombardía
> email: mol at ysbl.york.ac.uk
> http://www.ysbl.york.ac.uk/~mol
> -----------------------------------------------------------------------
> Our business in life is not to succeed, but
> to continue to fail in good spirits.			R.L. Stevenson

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