<html><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:10pt"><div style="" class="">Eric,</div><div class="" style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal"><span style="" class="">Oops. my bad, corrected the script.</span></div><div class="" style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal"><br style="" class=""><span style="" class=""></span></div><div class="" style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal"><span style="" class="">Thank you very much
 for attention and prompt reply to query.</span></div><div style="" class=""> </div><div style="" class=""><span class="" style="color:rgb(115, 115, 115)">--<br style="" class="">Regards<br style="" class=""></span></div><div class="" style="color:rgb(0, 0, 0);font-size:13px;font-family:arial, helvetica, clean, sans-serif;background-color:transparent;font-style:normal"><span class="" style="color:rgb(115, 115, 115)">Sariya</span><span class="" style="color:rgb(115, 115, 115)"><br style="" class=""></span><br style="" class=""></div><div style="display: block" class="yahoo_quoted"> <div class="" style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 10pt"> <div class="" style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 12pt"> <div style="" class="" dir="ltr"> <font style="" class="" face="Arial" size="2"> On Tuesday, April 22, 2014 2:04 PM,
 Eric Pettersen <pett@cgl.ucsf.edu> wrote:<br style="" class=""> </font> </div>  <div style="" class=""><div style="" class="" id="yiv4562132730"><div style="" class="">Hi Sariya,<div style="" class=""><span class="" style="white-space:pre">       </span>Your "check" file contains this (one) line:</div><div style="" class=""><br style="" class="" clear="none"></div><div style="" class="">67 23</div><div style="" class=""><br style="" class="" clear="none"></div><div style="" class="">which means that the residue range you generate is ":67-23" which contains nothing.  You want "check" to contain "23 67" so that your residue range becomes ":23-67".</div><div style="" class=""><br style="" class="" clear="none"></div><div style="" class="">--Eric</div><div style="" class=""><div style="" class=""><br style="" class="" clear="none">                        Eric Pettersen<br style=""
 class="" clear="none">                        UCSF Computer Graphics Lab<br style="" class="" clear="none">                        <a style="" class="" rel="nofollow" shape="rect" target="_blank" href="http://www.cgl.ucsf.edu/">http://www.cgl.ucsf.edu</a><br style="" class="" clear="none"><br style="" class="" clear="none"></div><div style="" class=""><div style="" class="" id="yiv4562132730yqt36009"><div style="" class="">On Apr 21, 2014, at 8:33 PM, Sanjeev Sariya <<a style="" class="" rel="nofollow" shape="rect" ymailto="mailto:s.sariya_work@ymail.com" target="_blank" href="mailto:s.sariya_work@ymail.com">s.sariya_work@ymail.com</a>> wrote:</div><br style="" class="" clear="none"><blockquote style="" class="" type="cite"><div style="" class=""><div class="" style="background-color:rgb(255, 255,
 255);font-family:HelveticaNeue, 'Helvetica Neue', Helvetica, Arial, 'Lucida Grande', sans-serif;font-size:10pt"><br class="" style="" clear="none">I am having 2 coordinates in check file. I want to take/read them and paint my pdb file loaded in chimera.<br class="" style="" clear="none">I have chimera in my ~/bin/<br class="" style="" clear="none">System specs: ubuntu 64 bit, 13.10, 4gb ram<br class="" style="" clear="none"><br class="" style="" clear="none">Below is the command I have used for script-chimera communication<br class="" style="" clear="none"><br class="" style="" clear="all">$ chimera64-1.8.1 --script "y.py check" -- Q6UXT6.pdb<br class="" style="" clear="none"><br class="" style="" clear="none"><br class="" style="" clear="none">I am storing values in listu and want to use them for coloring my file loaded.<br class="" style="" clear="none"><br class="" style="" clear="none">    rc("color blue :"+listu[0]+"-"+listu[1])<br
 class="" style="" clear="none"><br class="" style="" clear="none">This works well, if hard coded<br class="" style="" clear="none">rc
 ("color red :55-86")<br class="" style="" clear="none"><div class="" style=""><br class="" style="" clear="none"></div><div class="" style="font-size:13.3333px;font-family:HelveticaNeue, 'Helvetica Neue', Helvetica, Arial, 'Lucida Grande', sans-serif;background-color:transparent;font-style:normal">I do not get any error. The particular protein length is not colored.<br style="" class="" clear="none"></div><div class="" style="font-size:13.3333px;font-family:HelveticaNeue, 'Helvetica Neue', Helvetica, Arial, 'Lucida Grande', sans-serif;background-color:transparent;font-style:normal"><br class="" style="" clear="none"></div><div class="" style="font-size:13.3333px;font-family:HelveticaNeue, 'Helvetica Neue', Helvetica, Arial, 'Lucida Grande', sans-serif;background-color:transparent;font-style:normal">attached 3 files.</div><div class="" style="font-size:13.3333px;font-family:HelveticaNeue, 'Helvetica Neue', Helvetica, Arial, 'Lucida Grande',
 sans-serif;background-color:transparent;font-style:normal">Kindly suggest, how do I proceed.</div><div class="" style="font-size:13.3333px;font-family:HelveticaNeue, 'Helvetica Neue', Helvetica, Arial, 'Lucida Grande', sans-serif;background-color:transparent;font-style:normal"><br style="" class="" clear="none"></div><div class="" style=""> </div><div class="" style=""><span class="" style="color:rgb(115, 115, 115)">--<br class="" style="" clear="none">Regards<br class="" style="" clear="none"></span></div><div class="" style="font-size:13px;font-family:arial, helvetica, clean, sans-serif;background-color:transparent;font-style:normal"><span class="" style="color:rgb(115, 115, 115)">Sariya</span><span class="" style="color:rgb(115, 115, 115)"><br class="" style="" clear="none"></span><br class="" style="" clear="none"></div></div></div><span style="" class=""><Q6UXT6.pdb></span><span style="" class=""><y.py></span><span style=""
 class=""><check></span>_______________________________________________<br style="" class="" clear="none">Chimera-dev mailing list<br style="" class="" clear="none"><a style="" class="" rel="nofollow" shape="rect" ymailto="mailto:Chimera-dev@cgl.ucsf.edu" target="_blank" href="mailto:Chimera-dev@cgl.ucsf.edu">Chimera-dev@cgl.ucsf.edu</a><br style="" class="" clear="none">http://www.rbvi.ucsf.edu/mailman/listinfo/chimera-dev<br style="" class="" clear="none"></blockquote></div></div><br style="" class="" clear="none"></div><br style="" class="" clear="none"><br style="" class="" clear="none"></div></div><br style="" class=""><br style="" class=""></div>  </div> </div>  </div> </div></body></html>