<html><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:10pt"><br style="" class="">I am having 2 coordinates in check file. I want to take/read them and paint my pdb file loaded in chimera.<br style="" class="">I have chimera in my ~/bin/<br style="" class="">System specs: ubuntu 64 bit, 13.10, 4gb ram<br style="" class=""><br style="" class="">Below is the command I have used for script-chimera communication<br style="" class=""><br style="" class="" clear="all">$ chimera64-1.8.1 --script "y.py check" -- Q6UXT6.pdb<br style="" class=""><br style="" class=""><br style="" class="">I am storing values in listu and want to use them for coloring my file loaded.<br style="" class=""><br style="" class=""> rc("color blue :"+listu[0]+"-"+listu[1])<br style="" class=""><br style="" class="">This works well, if hard coded<br style="" class="">rc
("color red :55-86")<br style="" class=""><div style="" class=""><br style=""></div><div style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal" class="">I do not get any error. The particular protein length is not colored.<br></div><div style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal" class=""><br style="" class=""></div><div style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal" class="">attached 3 files.</div><div style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color:
transparent; font-style: normal" class="">Kindly suggest, how do I proceed.</div><div style="color: rgb(0, 0, 0); font-size: 13.3333px; font-family: HelveticaNeue,Helvetica Neue,Helvetica,Arial,Lucida Grande,sans-serif; background-color: transparent; font-style: normal" class=""><br></div><div style="" class=""> </div><div style="" class=""><span class="" style="color:rgb(115, 115, 115)">--<br style="" class="">Regards<br style="" class=""></span></div><div class="" style="color:rgb(0, 0, 0);font-size:13px;font-family:arial, helvetica, clean, sans-serif;background-color:transparent;font-style:normal"><span class="" style="color:rgb(115, 115, 115)">Sariya</span><span class="" style="color:rgb(115, 115, 115)"><br style="" class=""></span><br style="" class=""></div></div></body></html>