[chimera-dev] set bond to wire and specific width

[Jean Didier Pie Marechal]

Sorry to bug again,

I'd like to change the aspect of the bonds I selected using a python code. I'd like a wide wire representation. I am not sure how to handle the Wire attribute. With the drawMode I can  switch the representation from ball and stick to wire. However,  I do not manage to change the width. I thought that radius would work out but it sounds that is does not work for this mode. Any help?

Cheers
JD


for b in chimera.selection.currentBonds():
				b.drawMode=0
				b.radius=1

Dr. Jean-Didier Maréchal
Lecturer
The Computational Biotechnological Chemistry Team
Unitat de Química Física
Departament de Química
Universitat Autònoma de Barcelona
Edifici C.n.
08193 Cerdanyola (Barcelona)
Tel: +34.935814936
e-mail: JeanDidier.Marechal at uab.es
www: http://asklipio.qf.uab.es

----- Missatge original -----
De: Jean Didier Pie Marechal <JeanDidier.Marechal at uab.cat>
Data: Dijous, Octubre 11, 2012 2:19 pm
Assumpte: Re: attribute for selection?

> Sorry,
> 
> just to clarify my previous request:
> 
> this is a script that does what I want though a selection attribute 
> would be faster I think.
> 
> for a in chimera.openModels.list()[0].atoms:
> if a in chimera.selection.currentAtoms():
>         print "this atom of the molecule is selected" #to say 
> somethingelse: print "this one isn't"
> 
> cheers
> 
> 
> Dr. Jean-Didier Maréchal
> Lecturer
> The Computational Biotechnological Chemistry Team
> Unitat de Química Física
> Departament de Química
> Universitat Autònoma de Barcelona
> Edifici C.n.
> 08193 Cerdanyola (Barcelona)
> Tel: +34.935814936
> e-mail: JeanDidier.Marechal at uab.es
> www: http://asklipio.qf.uab.es
> 
> ----- Missatge original -----
> De: Jean Didier Pie Marechal <JeanDidier.Marechal at uab.cat>
> Data: Dijous, Octubre 11, 2012 12:39 pm
> Assumpte: attribute for selection?
> 
> > HI,
> > 
> > I want to add attributes to atoms that are selected and those 
> that 
> > aren't. I thought that atoms had a selection attribute already 
> > defined in chimera (something like a boolean) but I don't find 
> it. 
> > I am wrong with that?
> > 
> > best,
> > JD
> > 
> > 
> > Dr. Jean-Didier Maréchal
> > Lecturer
> > The Computational Biotechnological Chemistry Team
> > Unitat de Química Física
> > Departament de Química
> > Universitat Autònoma de Barcelona
> > Edifici C.n.
> > 08193 Cerdanyola (Barcelona)
> > Tel: +34.935814936
> > e-mail: JeanDidier.Marechal at uab.es
> > www: http://asklipio.qf.uab.es
> > 
>